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11 to 20 of 57 Results

2nd approach.gpkg Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas" Unknown - 296.0 KB - MD5: e81a7f8c94cba1edfca522ac63f79725 vector map in GeoPackage format with the contour lines generated during the 2nd approach step described in the text
Compare 2 DEMs.R Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas" R Syntax - 5.3 KB - MD5: 34f517884abd6922d89f935993adeba9 R script used to compare a reference and a test DEM, by calculating root mean square error (RMSE), mean absolute error (MAE), and the Pearson correlation coefficient
EMODNet_Viana.tif Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas" TIFF Image - 1.1 MB - MD5: bbf622f29ad1fbac633f376275aa7260 DEM file extracted from EMODNet, used in the 1st approach
LTH_AN2_201908_WGS84.tif Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas" TIFF Image - 608.7 MB - MD5: 83a969ab22897797f8418176466cd2a3 eprojected section of the original COSMO DEM
Remove sonar duplicates v2.R Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas" R Syntax - 2.5 KB - MD5: 924d6bdd36c1fe02b6ab93ef264cede1 R script to remove duplicated points, with the same coordinates. The depth is averaged to the individual depths of each duplicated point.
Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites? Jul 29, 2024 - Yeast Cell Trafficking and Signaling Barata-Antunes, Cláudia; de Hulster, Erik; Cardoso, Clara; Pronk, Jack; Ariño, Joaquín; Mans, Robert; Paiva, Sandra, 2024, "Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites?", https://doi.org/10.34622/datarepositorium/LWNKLQ, Repositório de Dados da Universidade do Minho, V1, UNF:6:KmEqVXGDcefdiZxzWguEZA== [fileUNF] Comparison of mRNA levels by RNA-Seq between Saccharomyces cerevisiae yeast cells grown in steady state, aerobic, continuous cultures growing in synthetic medium with 50 mM ethanol and 30 mM lactate at a dilution rate of 0.07 h-1 and set up at different extracellular pHs (pH 6.0;...
00_Readme.txt Jul 29, 2024 - Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites? Plain Text - 6.7 KB - MD5: bbfad30f1a0b3311db9fc1464b92f6f3 Text File containing all metadata: methodology, dataset description, license
gene_count.tab Jul 29, 2024 - Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites? Tab-Delimited - 1.8 MB - MD5: 2d56fe98d92ed4b029b164482bed0f04 excel file containing the number of reads mapped to each gene
gene_fpkm.tab Jul 29, 2024 - Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites? Tab-Delimited - 1.1 MB - MD5: 92f471df9fa3b4a9adb502aa593cda9f excel file with "Reads Per Kilobase Million" data for each sample
pH65R13_1.fq.gz Jul 29, 2024 - Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites? Gzip Archive - 988.7 MB - MD5: 32a9b9fa902310c5c1018087e9281ff3 Raw_fastq_file_pH6.5_bioreactor13_sequencing_run_1

2nd approach.gpkg

Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas"

Unknown - 296.0 KB - MD5: e81a7f8c94cba1edfca522ac63f79725

vector map in GeoPackage format with the contour lines generated during the 2nd approach step described in the text

Compare 2 DEMs.R

Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas"

R Syntax - 5.3 KB - MD5: 34f517884abd6922d89f935993adeba9

R script used to compare a reference and a test DEM, by calculating root mean square error (RMSE), mean absolute error (MAE), and the Pearson correlation coefficient

EMODNet_Viana.tif

Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas"

TIFF Image - 1.1 MB - MD5: bbf622f29ad1fbac633f376275aa7260

DEM file extracted from EMODNet, used in the 1st approach

LTH_AN2_201908_WGS84.tif

Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas"

TIFF Image - 608.7 MB - MD5: 83a969ab22897797f8418176466cd2a3

eprojected section of the original COSMO DEM

Remove sonar duplicates v2.R

Sep 4, 2024 - Supplemental material for "Assessing the Potential of Consumer-grade Fish Finders to Improve Coastal Habitat Mapping in Data-poor Areas"

R Syntax - 2.5 KB - MD5: 924d6bdd36c1fe02b6ab93ef264cede1

R script to remove duplicated points, with the same coordinates. The depth is averaged to the individual depths of each duplicated point.

Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites?

Jul 29, 2024 - Yeast Cell Trafficking and Signaling

Barata-Antunes, Cláudia; de Hulster, Erik; Cardoso, Clara; Pronk, Jack; Ariño, Joaquín; Mans, Robert; Paiva, Sandra, 2024, "Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites?", https://doi.org/10.34622/datarepositorium/LWNKLQ, Repositório de Dados da Universidade do Minho, V1, UNF:6:KmEqVXGDcefdiZxzWguEZA== [fileUNF]

Comparison of mRNA levels by RNA-Seq between Saccharomyces cerevisiae yeast cells grown in steady state, aerobic, continuous cultures growing in synthetic medium with 50 mM ethanol and 30 mM lactate at a dilution rate of 0.07 h-1 and set up at different extracellular pHs (pH 6.0;...

00_Readme.txt

Jul 29, 2024 - Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites?

Plain Text - 6.7 KB - MD5: bbfad30f1a0b3311db9fc1464b92f6f3

Text File containing all metadata: methodology, dataset description, license

gene_count.tab

Jul 29, 2024 - Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites?

Tab-Delimited - 1.8 MB - MD5: 2d56fe98d92ed4b029b164482bed0f04

excel file containing the number of reads mapped to each gene

gene_fpkm.tab

Jul 29, 2024 - Endocytosis of the plasma membrane carboxylate transporter Jen1 in Saccharomyces cerevisiae under alkali stress: a mechanism for preventing loss of essential metabolites?

Tab-Delimited - 1.1 MB - MD5: 92f471df9fa3b4a9adb502aa593cda9f

excel file with "Reads Per Kilobase Million" data for each sample