Thymic function as a predictor of immune recovery in chronically HIV-infected patients initiating antiretroviral therapy (ICPSR doi:10.34622/datarepositorium/SI73DF)

View:

Part 1: Document Description
Part 2: Study Description
Part 3: Data Files Description
Part 4: Variable Description
Entire Codebook

Thymic function as a predictor of immune recovery in chronically HIV-infected patients initiating antiretroviral therapy

doi:10.34622/datarepositorium/SI73DF

Repositório de Dados da Universidade do Minho

2021-07-24

1

Silva, Rita, 2021, "Thymic function as a predictor of immune recovery in chronically HIV-infected patients initiating antiretroviral therapy", https://doi.org/10.34622/datarepositorium/SI73DF, Repositório de Dados da Universidade do Minho, V1, UNF:6:hjTP06iLeq4hOpcoNOYoiQ== [fileUNF]

Thymic function as a predictor of immune recovery in chronically HIV-infected patients initiating antiretroviral therapy

doi:10.34622/datarepositorium/SI73DF

Silva, Rita (Universidade do Minho)

Repositório de Dados da Universidade do Minho

Rita Rb-Silva

Silva, Rita

2020-12-29

Medicine, Health and Life Sciences, poor immunological responders; predictive modeling; immune recovery; CD4+ T cells; thymic function; immune activation; antiretroviral therapy; HIV infection

Dataset containing data related to the article "Thymic function as a predictor of immune recovery in chronically HIV-infected patients initiating antiretroviral therapy" (doi: 10.3389/fimmu.2019.00025).

CC0 Waiver

10.3389/fimmu.2019.00025

Rb-Silva R, Nobrega C, Azevedo C, Athayde E, Canto-Gomes J, Ferreira I, Cheynier R, Yates AJ, Horta A, Correia-Neves M. Thymic Function as a Predictor of Immune Recovery in Chronically HIV-Infected Patients Initiating Antiretroviral Therapy. Front Immunol. 2019 Feb 5;10:25. doi: 10.3389/fimmu.2019.00025. PMID: 30804925; PMCID: PMC6370619.

• Number of cases: 33

• No. of variables per record: 1

• Type of File: text/tab-separated-values

UNF:6:NWnvAUnN6bJ5DFvhbowLwQ==

• Number of cases: 33

• No. of variables per record: 44

• Type of File: text/tab-separated-values

UNF:6:a2iOrAvqiQuPDXuNd+iTOg==

• patient_id;cluster;CD4_0;CD4_2;CD4_6;CD4_9;CD4_12;CD4_16;CD4_20;CD4_24;CD4_28;CD4_32;CD4_36;CD4_42;CD4_48;CD4_54;CD4_60 - patient_id;cluster;CD4_0;CD4_2;CD4_6;CD4_9;CD4_12;CD4_16;CD4_20;CD4_24;CD4_28;CD4_32;CD4_36;CD4_42;CD4_48;CD4_54;CD4_60
• patientid - patientid
• cluster - cluster
• age0 - age0
• LogVL0 - LogVL0
• CD40 - CD40
• CD42 - CD42
• CD46 - CD46
• CD49 - CD49
• CD412 - CD412
• CD416 - CD416
• CD420 - CD420
• CD424 - CD424
• CD428 - CD428
• CD432 - CD432
• CD436 - CD436
• CD442 - CD442
• CD448 - CD448
• CD454 - CD454
• CD460 - CD460
• sjTREC0cells - sjTREC0cells
• sjTREC6cells - sjTREC6cells
• sjTREC12cells - sjTREC12cells
• sjTREC24cells - sjTREC24cells
• sjTREC36cells - sjTREC36cells
• sjTREC0wb - sjTREC0wb
• sjTREC6wb - sjTREC6wb
• sjTREC12wb - sjTREC12wb
• sjTREC24wb - sjTREC24wb
• sjTREC36wb - sjTREC36wb
• sjbTREC0 - sjbTREC0
• sjbTREC6 - sjbTREC6
• sjbTREC12 - sjbTREC12
• sjbTREC24 - sjbTREC24
• sjbTREC36 - sjbTREC36
• CD4CD45RACD31TcellsuL0 - CD4CD45RACD31TcellsuL0
• CD4CD45RACD31TcellsuL6 - CD4CD45RACD31TcellsuL6
• CD4CD45RACD31TcellsuL12 - CD4CD45RACD31TcellsuL12
• CD4CD45RACD31TcellsuL24 - CD4CD45RACD31TcellsuL24
• CD4CD45RACD31TcellsuL36 - CD4CD45RACD31TcellsuL36
• CD4CD45RACD31Tcellsperc0 - CD4CD45RACD31Tcellsperc0
• CD4CD45RACD31Tcellsperc6 - CD4CD45RACD31Tcellsperc6
• CD4CD45RACD31Tcellsperc12 - CD4CD45RACD31Tcellsperc12
• CD4CD45RACD31Tcellsperc24 - CD4CD45RACD31Tcellsperc24
• CD4CD45RACD31Tcellsperc36 - CD4CD45RACD31Tcellsperc36

f425 Location:

Variable Format: character

Notes: UNF:6:NWnvAUnN6bJ5DFvhbowLwQ==

f448 Location:

Variable Format: character

Notes: UNF:6:4Sxx25ssh9RYmkbiQbayZQ==

f448 Location:

Summary Statistics: Mean 1.5757575757575755; Valid 33.0; Max. 2.0; Min. 1.0; StDev 0.5018903659106632;

Variable Format: numeric

Notes: UNF:6:+ff2B1TgzeJlzfi0ufLQPg==

f448 Location:

Summary Statistics: Valid 33.0; Mean 42.24242424242424; Min. 23.0; Max. 67.0; StDev 10.425420564149627

Variable Format: numeric

Notes: UNF:6:ZejyFVr3kxQeBSbnADNGeQ==

f448 Location:

Summary Statistics: Mean 5.665454545454545; Max. 6.98; Min. 4.78; StDev 0.5999327613839889; Valid 33.0

Variable Format: numeric

Notes: UNF:6:FBwdEjo5MyMKBn/WTmLkQg==

f448 Location:

Summary Statistics: Valid 33.0; Min. 8.0; StDev 61.19180909239406; Mean 85.0; Max. 193.0;

Variable Format: numeric

Notes: UNF:6:W1meuPtHqO6EkymUfm+SBw==

f448 Location:

Summary Statistics: Mean 216.1290322580645; StDev 118.33391791465478; Max. 489.0; Min. 43.0; Valid 31.0;

Variable Format: numeric

Notes: UNF:6:T3irlTj5BfensPrBB5Ezig==

f448 Location:

Summary Statistics: Min. 47.0; Valid 33.0; Mean 227.24242424242425; StDev 114.91247492739588; Max. 602.0

Variable Format: numeric

Notes: UNF:6:edHDhPMvi5Aob78/TAIwCQ==

f448 Location:

Summary Statistics: StDev 137.8217857067039; Min. 89.0; Max. 621.0; Valid 26.0; Mean 248.7307692307692

Variable Format: numeric

Notes: UNF:6:jfkna2Zw4MFbAKhs7APdGw==

f448 Location:

Summary Statistics: Min. 65.0; Max. 774.0; Mean 292.69696969696963; Valid 33.0; StDev 164.4598136416015

Variable Format: numeric

Notes: UNF:6:RNbfBeqRBIkX9QIBsrEgkw==

f448 Location:

Summary Statistics: StDev 157.17567617738496; Mean 312.54545454545456; Valid 33.0; Max. 819.0; Min. 106.0

Variable Format: numeric

Notes: UNF:6:AcmtAciXb4KlMHpN9iIofA==

f448 Location:

Summary Statistics: Valid 33.0; Min. 121.0; StDev 157.4600057446046; Mean 358.81818181818187; Max. 768.0

Variable Format: numeric

Notes: UNF:6:WGStAAQZKbLQTvvSkMTAOQ==

f448 Location:

Summary Statistics: Min. 152.0; Valid 33.0; Mean 344.24242424242425; Max. 726.0; StDev 133.52973224693963

Variable Format: numeric

Notes: UNF:6:qGkUlHL9SVFjP+LPH+3Mhw==

f448 Location:

Summary Statistics: Min. 143.0; Mean 391.6060606060607; Valid 33.0; Max. 853.0; StDev 170.03123598951225

Variable Format: numeric

Notes: UNF:6:VbC4kkd54v1z4bdivNR9sg==

f448 Location:

Summary Statistics: Valid 33.0; Min. 188.0; Mean 408.1212121212122; StDev 190.66704578527683; Max. 1044.0

Variable Format: numeric

Notes: UNF:6:fvmcWZjdZN0HTY8sGdPEZQ==

f448 Location:

Summary Statistics: Max. 896.0; Mean 405.25; Min. 166.0; Valid 32.0; StDev 172.332574196036

Variable Format: numeric

Notes: UNF:6:c7Ymtmteq75Zxmak6VBh2Q==

f448 Location:

Summary Statistics: StDev 188.24269053886408; Max. 986.0; Valid 27.0; Mean 443.81481481481484; Min. 177.0

Variable Format: numeric

Notes: UNF:6:c/5w2bhUsmNDVUJMiLceCw==

f448 Location:

Summary Statistics: Min. 230.0; StDev 163.39705768935514; Valid 26.0; Mean 430.9615384615384; Max. 902.0;

Variable Format: numeric

Notes: UNF:6:/DAopgiZWCaynICE+hW4EQ==

f448 Location:

Summary Statistics: Max. 1048.0; Mean 477.25; Min. 223.0; Valid 24.0; StDev 207.70176152149128

Variable Format: numeric

Notes: UNF:6:6w1LH3X58zVLH1CxUnRCqg==

f448 Location:

Summary Statistics: Mean 488.5714285714286; StDev 172.27117327880813; Max. 825.0; Min. 261.0; Valid 21.0

Variable Format: numeric

Notes: UNF:6:KMQwc4XYvxoO6yZKH3m00Q==

f448 Location:

Summary Statistics: StDev 72.40098240181035; Mean 78.59285714285714; Valid 14.0; Max. 190.1; Min. 1.0

Variable Format: numeric

Notes: UNF:6:zDPoJn7udsW5xUu4vF0pXA==

f448 Location:

Summary Statistics: Mean 228.9; StDev 191.55552318202277; Valid 14.0; Max. 628.6; Min. 16.9

Variable Format: numeric

Notes: UNF:6:pVuPEwTotD2t0lzUOBIeVA==

f448 Location:

Summary Statistics: Max. 1924.8; StDev 500.92646166877626; Valid 14.0; Mean 343.5; Min. 41.3;

Variable Format: numeric

Notes: UNF:6:pCvfYAqjE3+SMw5JgA8u0Q==

f448 Location:

Summary Statistics: Mean 566.9071428571428; Min. 75.3; Max. 3084.0; StDev 759.1354895428856; Valid 14.0;

Variable Format: numeric

Notes: UNF:6:RT8mxAtq+MTwpVhFDLn3MQ==

f448 Location:

Summary Statistics: Max. 3343.0; StDev 841.7930690163446; Mean 549.3214285714286; Min. 72.3; Valid 14.0;

Variable Format: numeric

Notes: UNF:6:6jyKiBLM013GphMgJ8O0rA==

f448 Location:

Summary Statistics: Max. 3556.5; Min. 14.6; Valid 14.0; StDev 1183.3264890892199; Mean 1240.7857142857142

Variable Format: numeric

Notes: UNF:6:GmOYQ5Rg5BDOCmjavVr7rA==

f448 Location:

Summary Statistics: Max. 13566.7; Min. 257.2; Mean 5019.378571428571; Valid 14.0; StDev 3682.743955296746;

Variable Format: numeric

Notes: UNF:6:Xu6aCjp34MLYMtdeKygqyQ==

f448 Location:

Summary Statistics: Valid 14.0; Min. 745.1; StDev 7806.213423754042; Max. 28872.7; Mean 6924.621428571429

Variable Format: numeric

Notes: UNF:6:HB8iBYo1GgAH6SNUPydgaQ==

f448 Location:

Summary Statistics: Valid 14.0; Min. 1340.1; StDev 11712.003011734081; Max. 47494.3; Mean 10843.507142857143

Variable Format: numeric

Notes: UNF:6:P58s++4ulf4sqQT33CKhDw==

f448 Location:

Summary Statistics: Valid 14.0; Max. 72209.3; Min. 1562.6; Mean 11666.150000000001; StDev 18291.04463537995

Variable Format: numeric

Notes: UNF:6:apwVmT8hQMGingPgrUEU5Q==

f448 Location:

Summary Statistics: Mean 17.535714285714285; Max. 54.1; StDev 16.29901399296464; Min. 0.3; Valid 14.0;

Variable Format: numeric

Notes: UNF:6:wVxt3MLaKEiNwiVNPBcwxQ==

f448 Location:

Summary Statistics: Min. 3.0; Max. 49.4; StDev 12.882051573691697; Valid 14.0; Mean 24.642857142857142

Variable Format: numeric

Notes: UNF:6:rf4bz3aLtRLR+70Ln4WD+g==

f448 Location:

Summary Statistics: Valid 14.0; Max. 131.5; StDev 31.73841659428031; Min. 5.5; Mean 31.964285714285715

Variable Format: numeric

Notes: UNF:6:CYK2POUuf4bMFdwhoEFV5A==

f448 Location:

Summary Statistics: Mean 36.142857142857146; Valid 14.0; StDev 32.74018265739458; Max. 114.4; Min. 4.7

Variable Format: numeric

Notes: UNF:6:NwGz3XYkYiVOjX1SbZ8lXQ==

f448 Location:

Summary Statistics: Mean 32.94285714285714; Max. 67.3; StDev 15.97718153086863; Valid 14.0; Min. 8.6;

Variable Format: numeric

Notes: UNF:6:Sd1EOdenuYSsSdpGRgSY4g==

f448 Location:

Variable Format: character

Notes: UNF:6:KwM/lG7jrm/zpFTNfFu1Ag==

f448 Location:

Summary Statistics: Valid 31.0; Mean 33.535483870967745; StDev 37.95157922394531; Min. 0.3; Max. 177.0

Variable Format: numeric

Notes: UNF:6:odNwdjW4ezBjzsitsCEIXg==

f448 Location:

Summary Statistics: StDev 69.57539068166092; Mean 59.646666666666675; Min. 1.2; Valid 30.0; Max. 333.6;

Variable Format: numeric

Notes: UNF:6:aRgVmU9wD+nkSg+pmNagmA==

f448 Location:

Summary Statistics: Min. 3.3; Max. 283.1; Mean 80.028125; StDev 65.64992314751171; Valid 32.0

Variable Format: numeric

Notes: UNF:6:4ipxcR13tuIFbS8G19EO3A==

f448 Location:

Summary Statistics: StDev 91.67153784340432; Min. 6.2; Valid 30.0; Max. 409.5; Mean 106.81333333333335;

Variable Format: numeric

Notes: UNF:6:Fh4XrGh/PoCY9Be0E5Ax7g==

f448 Location:

Summary Statistics: Valid 30.0; Mean 10.401666666666667; StDev 11.59341730089294; Max. 44.3; Min. 0.0

Variable Format: numeric

Notes: UNF:6:OWBZ63lJxbMxDvZpEBdU6w==

f448 Location:

Summary Statistics: Max. 34.4; Min. 0.2; Valid 31.0; Mean 12.141935483870968; StDev 9.027763628331897

Variable Format: numeric

Notes: UNF:6:QG5Xq1vvkSbxg4pfskizmg==

f448 Location:

Summary Statistics: Min. 0.6; Valid 30.0; StDev 11.805480901273986; Max. 43.1; Mean 16.74

Variable Format: numeric

Notes: UNF:6:VqN/ksNwcxYbcf0EGEhVag==

f448 Location:

Summary Statistics: Mean 21.115625; StDev 13.056455809539266; Min. 1.3; Max. 45.0; Valid 32.0;

Variable Format: numeric

Notes: UNF:6:BMK8jrKhgO4a0YvIoy8J+A==

f448 Location:

Summary Statistics: Max. 45.7; Min. 2.6; Mean 22.98; StDev 11.118279450123318; Valid 30.0;

Variable Format: numeric

Notes: UNF:6:/pT63gzIs901k96LjVVjAA==